../../tmp/servers/virsirnadb/961376805
Result for your query siRNA sequence
| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | Strain name | Start | Alignment | End | % Identity |
| Query | virsi1202 | 1 | gtgaaaggtccgtgagccg | 19 | |
| D85516.1 | Hepatitis C virus genomic RNA, complete cds | 9472 | ................... | 9490 | 100 |
| AF011751.1 | Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds | 9536 | ................... | 9554 | 100 |
| AF011752.1 | Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds | 9536 | ................... | 9554 | 100 |
| AF011753.1 | Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds | 9536 | ................... | 9554 | 100 |
| D89815.1 | Hepatitis C virus genomic RNA, complete sequence | 9485 | ................... | 9503 | 100 |
| AF054247.1 | Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L6S, complete | 9532 | ................... | 9550 | 100 |
| AF054248.1 | Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L2S, complete | 9532 | ................... | 9550 | 100 |
| AF054249.1 | Hepatitis C virus subtype 1b strain HC-J4 isolate pCV-J4L4S, complete | 9533 | ................... | 9551 | 100 |
| AJ238799.1 | Hepatitis C virus type 1b complete genome, isolate Con1 | 9542 | ................... | 9560 | 100 |
| AF176573.1 | Hepatitis C virus subtype 1b strain 274933RU, complete genome | 9537 | ................... | 9555 | 100 |
| AB016785.1 | Hepatitis C virus genomic RNA, complete sequence | 9475 | ................... | 9493 | 100 |
| AF169002.1 | Hepatitis C virus subtype 2a isolate NDM228, complete genome | 9597 | ................... | 9615 | 100 |
| AF169003.1 | Hepatitis C virus subtype 2a isolate G2aK1, complete genome | 9630 | ................... | 9648 | 100 |
| AF169004.1 | Hepatitis C virus subtype 2a isolate G2aK3, complete genome | 9590 | ................... | 9608 | 100 |
| AF169005.1 | Hepatitis C virus subtype 2a isolate NDM59, complete genome | 9637 | ................... | 9655 | 100 |
| AF271632.1 | Hepatitis C virus subtype 1a clone pHCV-1/SF9 A, complete genome | 9555 | ................... | 9573 | 100 |
| AB030907.1 | Hepatitis C virus (isolate JPUT971017) genomic RNA, complete genome | 9591 | ................... | 9609 | 100 |
| AJ278830.1 | Hepatitis C virus genomic RNA for polyprotein gene | 9547 | ................... | 9565 | 100 |
| AB049088.1 | Hepatitis C virus genomic RNA, complete genome, isolate: HCVT094 | 9553 | ................... | 9571 | 100 |
| AB049089.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT10 | 9508 | ................... | 9526 | 100 |
| AB049090.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14 | 9508 | ................... | 9526 | 100 |
| AB049091.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT14 | 9484 | ................... | 9502 | 100 |
| AB049095.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT16 | 9522 | ................... | 9540 | 100 |
| AB049101.1 | Hepatitis C virus gene for polyprotein, complete cds, isolate: HCVT22 | 9535 | ................... | 9553 | 100 |
| AF333324.1 | Hepatitis C virus type 1b polyprotein mRNA, complete cds | 9524 | ................... | 9542 | 100 |
| AB047639.1 | Hepatitis C virus (isolate JFH-1) genomic RNA, complete genome | 9615 | ................... | 9633 | 100 |
| AB047640.1 | Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-1 | 9611 | ................... | 9629 | 100 |
| AB047641.1 | Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-2 | 9596 | ................... | 9614 | 100 |
| AB047642.1 | Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-3 | 9615 | ................... | 9633 | 100 |
| AB047643.1 | Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-4 | 9578 | ................... | 9596 | 100 |
| AB047644.1 | Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-5 | 9628 | ................... | 9646 | 100 |
| AB047645.1 | Hepatitis C virus gene for polyprotein, complete cds, clone:JCH-6 | 9620 | ................... | 9638 | 100 |
| AF356827.1 | Hepatitis C virus subtype 1b isolate HCV-S1, complete genome | 9546 | ................... | 9564 | 100 |
| AY045702.1 | Hepatitis C virus isolate HCR6, complete genome | 9548 | ................... | 9566 | 100 |
| AF139594.2 | Hepatitis C virus subtype 1b strain HCV-N, complete genome | 9553 | ................... | 9571 | 100 |
| AB080299.1 | Hepatitis C virus genomic RNA, complete genome, isolate:M1LE | 9524 | ................... | 9542 | 100 |
| AY460204.1 | Hepatitis C virus from Shanghai, complete genome | 9514 | ................... | 9532 | 100 |
| AY746460.1 | Hepatitis C virus genotype 2a polyprotein gene, complete cds | 9626 | ................... | 9644 | 100 |
| D84263.2 | Hepatitis C virus (isolate VN235) genomic RNA, complete genome | 9552 | ................... | 9570 | 100 |
| D84264.2 | Hepatitis C virus (isolate VN405) genomic RNA, complete genome | 9538 | ................... | 9556 | 100 |
| D84265.2 | Hepatitis C virus (isolate VN004) genomic RNA, complete genome | 9559 | ................... | 9577 | 100 |
| AB191333.1 | Hepatitis C virus genomic RNA, complete genome, strain:0 | 9524 | ................... | 9542 | 100 |
| DQ071885.1 | Hepatitis C virus subtype 1b polyprotein mRNA, complete cds | 9542 | ................... | 9560 | 100 |
| AB249644.1 | Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima | 9496 | ................... | 9514 | 100 |
| EF621489.1 | Hepatitis C virus subtype 1a strain HC-TN, complete genome | 9536 | ................... | 9554 | 100 |
| EU363761.1 | Recombinant Hepatitis C virus H77C/JFH1, complete genome | 9603 | ................... | 9621 | 100 |
| AB426117.1 | Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima | 9496 | ................... | 9514 | 100 |
| AB435162.2 | Hepatitis C virus subtype 1b genomic RNA, complete genome, hiroshima | 9558 | ................... | 9576 | 100 |
| EU857431.1 | Hepatitis C virus subtype 1b isolate Whu, complete genome | 9540 | ................... | 9558 | 100 |
| AB442219.1 | Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B- | 9524 | ................... | 9542 | 100 |
| AB442220.1 | Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH | 9524 | ................... | 9542 | 100 |
| AB442221.1 | Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: KAH | 9524 | ................... | 9542 | 100 |
| AB442222.1 | Hepatitis C virus subtype 1b genomic RNA, complete genome, clone: 1B- | 9527 | ................... | 9545 | 100 |
| FN435993.1 | Hepatitis C virus subtype 1b complete genome, isolate EU1, genomic RN | 9550 | ................... | 9568 | 100 |
| AB520610.1 | Hepatitis C virus subtype 1a genomic RNA, complete genome, strain: HC | 9535 | ................... | 9553 | 100 |
| GU133617.1 | Hepatitis C virus subtype 1b, complete genome | 9583 | ................... | 9601 | 100 |
| D84262.2 | Hepatitis C virus (isolate Th580) genomic RNA, complete genome GCCAGC | 9565 | ................... | 9583 | 100 |
| AF177036.1 | Hepatitis C virus subtype 2a strain HC-J6CH clone pJ6CF, complete gen | 9648 | ................... | 9666 | 100 |
| AF009606.1 | Hepatitis C virus subtype 1a polyprotein gene, complete cds | 9583 | ................... | 9601 | 100 |
| FN666428.2 | Hepatitis C virus gene for polyprotein, genomic RNA, subtype 2q, isol | 9530 | .................._ | 9547 | 94 |
| AJ132997.1 | Hepatitis C virus, complete genome, isolate HCV-AD78P1 | 9470 | ..........g........ | 9488 | 94 |